You might have to start from scratch. Install your stock unrooted firmware, re root using the Chainfire method through Odin, install the custom recovery you used to make your last Nandroid that was working OK, and restore it.
Samsung Galaxy Note 3 SM-N9005
ROOTED STOCK FIRMWARE TWRP WITH AEL KERNEL V7.9
"The only foolish question is the question not asked"-Anon