You can share that script that has been pulled down so we can try to replicate your success??
I don't think it would help, but here are the details of what I went through:
a. downloaded and installed Eclips3's HTC Eris Master Application
b. invoked Step #1 (download); this one step worked
c. invoked Step #2 (get phone rooted); this step worked too (this is the base root ROM (very old 2.1 version)
d. invoked Step #3 (recovery install); this step hung-up on me (many times) without me being able to tell if it really worked (I believe that it didn't)
e. invoked Step #4 (new ROM install); this step also hung-up on me; I believe my hangs were examples of the reason that this this app got pulled by Eclips3 until they could figure-out what is causing these hang-ups;
I tried the app's steps #2 through #4 many times before trying on a different computer (original was Vista; new one was Windows 7); Step #3 (recovery install) acted a little different on the Windows 7 box, but I still couldn't boot into recovery...
After many cycles of doing this, I finally decided to manually follow the instructions for flashing Amon-RA's custom recovery (this is documented in many posts on both AF and xda; I used Ivanmmjs "[Walkthrough] From stock (1.5) to rooted 2.1 (update - new link)" thread on xda for these instructions. That finally did seem to work!
Side note: I actually believe that there are many folks who got hung-up in the EMA just like I did and got the base (old) 2.1 root ROM installed and thought that they were "fully" rooted. They were rooted, but they didn't get the custom ROM that they probably thought they were
After this, I just had to make sure my custom ROM (Ivan's Eris Official 1.0 w/OC) was on my /sdcard, reboot into Amon-RAs custom recovery, do the wipes / factory reset, and then flash the new ROM. Sounds easy to me now, but it was scary at the time
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Keep in mind that I was trying to follow the instructions very carefully and deliberately (and slowly). I checked and double-checked my typing, commands, etc. I originally decided to use the EMA because I thought it was going to be a very simple and painless process. It was for many folks, but I think Windows Vista was my issue. Like I said, it got me started and did get me rooted--I just needed to finish the steps for completing the custom ROM installation.
Again, I want to thank Eclips3 and Jamezelle for making the EMA available to everyone and working hard to develop and update it. Also, Ivanmmj for his awesome Eris Official 1.0 w/OC custom ROM. And to Paul Kopalek for guiding me through my last steps toward root-hood
I hope this helps and I hope you guys get root! Let me know if you have any other questions.
P.S. it does look like the Eris Master Application is back-up and available now (thanks Eclips3).